STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCOM_1176950ATP binding protein, putative. (417 aa)    
Predicted Functional Partners:
RCOM_1614510
Uncharacterized protein.
   
   0.742
RCOM_0775920
Uncharacterized protein.
   
   0.734
RCOM_1469480
Uncharacterized protein.
  
 
   0.572
RCOM_0126310
Uncharacterized protein.
  
 
   0.571
RCOM_1451960
NADH dehydrogenase, putative.
   
   0.558
RCOM_1600460
Uncharacterized protein.
   
   0.543
RCOM_1325300
zf-CHCC domain-containing protein.
   
   0.540
RCOM_1438980
NADH dehydrogenase, putative.
   
   0.525
RCOM_1324640
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
   
   0.522
RCOM_0821870
Minichromosome maintenance protein MCM, putative; Belongs to the MCM family.
      
 0.509
Your Current Organism:
Ricinus communis
NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean
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