STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCOM_0906820Transcription factor, putative. (494 aa)    
Predicted Functional Partners:
RCOM_0116230
OVATE domain-containing protein.
  
     0.521
RCOM_0325080
VQ domain-containing protein.
  
     0.514
RCOM_1586340
Uncharacterized protein.
  
     0.508
RCOM_0996630
Uncharacterized protein.
  
     0.508
RCOM_1590230
WW domain-containing protein.
  
     0.505
RCOM_0629030
GTD-binding domain-containing protein.
  
     0.501
RCOM_0038740
Uncharacterized protein.
  
     0.498
RCOM_1617270
Uncharacterized protein.
  
     0.497
RCOM_1328100
WRC domain-containing protein.
  
     0.497
RCOM_1443930
Uncharacterized protein.
  
     0.496
Your Current Organism:
Ricinus communis
NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.