STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCOM_1004030Aspartic proteinase oryzasin-1, putative; Belongs to the peptidase A1 family. (500 aa)    
Predicted Functional Partners:
RCOM_1081460
Oligopeptidase, putative.
      
 0.815
RCOM_1679670
Vacuolar-processing enzyme.
   
  
 0.757
RCOM_0798420
Vacuolar-processing enzyme, putative.
   
  
 0.757
RCOM_0184110
Sweet protein mabinlin-1, chain B.
      
 0.695
RCOM_0183870
Uncharacterized protein.
      
 0.654
aap1
Amino acid transporter, putative.
      
 0.652
RCOM_1697100
Aspartic proteinase nepenthesin-1, putative; Belongs to the peptidase A1 family.
      
 0.408
Your Current Organism:
Ricinus communis
NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.