Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| RBR | RCOM_0225530 | B9SVG9 | B9SVY5 | Retinoblastoma-related protein; Regulator of biological processes that recruits a histone deacetylase to control gene transcription. May play a role in the entry into mitosis, negatively regulating the cell proliferation. Formation of stable complexes with geminiviridae replication-associated proteins may create a cellular environment which favors viral DNA replication (By similarity); Belongs to the retinoblastoma protein (RB) family. | E2F4,5, putative. | 0.963 |
| RBR | RCOM_0680380 | B9SVG9 | B9RT24 | Retinoblastoma-related protein; Regulator of biological processes that recruits a histone deacetylase to control gene transcription. May play a role in the entry into mitosis, negatively regulating the cell proliferation. Formation of stable complexes with geminiviridae replication-associated proteins may create a cellular environment which favors viral DNA replication (By similarity); Belongs to the retinoblastoma protein (RB) family. | Always early, putative. | 0.918 |
| RBR | RCOM_0897930 | B9SVG9 | B9RV08 | Retinoblastoma-related protein; Regulator of biological processes that recruits a histone deacetylase to control gene transcription. May play a role in the entry into mitosis, negatively regulating the cell proliferation. Formation of stable complexes with geminiviridae replication-associated proteins may create a cellular environment which favors viral DNA replication (By similarity); Belongs to the retinoblastoma protein (RB) family. | Tso1, putative. | 0.678 |
| RBR | RCOM_1282600 | B9SVG9 | B9SCZ6 | Retinoblastoma-related protein; Regulator of biological processes that recruits a histone deacetylase to control gene transcription. May play a role in the entry into mitosis, negatively regulating the cell proliferation. Formation of stable complexes with geminiviridae replication-associated proteins may create a cellular environment which favors viral DNA replication (By similarity); Belongs to the retinoblastoma protein (RB) family. | E2F4,5, putative. | 0.789 |
| RBR | RCOM_1354870 | B9SVG9 | B9S0H1 | Retinoblastoma-related protein; Regulator of biological processes that recruits a histone deacetylase to control gene transcription. May play a role in the entry into mitosis, negatively regulating the cell proliferation. Formation of stable complexes with geminiviridae replication-associated proteins may create a cellular environment which favors viral DNA replication (By similarity); Belongs to the retinoblastoma protein (RB) family. | Transcription factor Dp-1, putative; Involved in the regulation of the G1/S transition. Increases the DNA binding activity of E2F proteins after heterodimerization. Belongs to the E2F/DP family. | 0.977 |
| RBR | RCOM_1431990 | B9SVG9 | B9RF70 | Retinoblastoma-related protein; Regulator of biological processes that recruits a histone deacetylase to control gene transcription. May play a role in the entry into mitosis, negatively regulating the cell proliferation. Formation of stable complexes with geminiviridae replication-associated proteins may create a cellular environment which favors viral DNA replication (By similarity); Belongs to the retinoblastoma protein (RB) family. | Always early, putative. | 0.918 |
| RBR | RCOM_1597450 | B9SVG9 | B9R878 | Retinoblastoma-related protein; Regulator of biological processes that recruits a histone deacetylase to control gene transcription. May play a role in the entry into mitosis, negatively regulating the cell proliferation. Formation of stable complexes with geminiviridae replication-associated proteins may create a cellular environment which favors viral DNA replication (By similarity); Belongs to the retinoblastoma protein (RB) family. | E2F4,5, putative. | 0.961 |
| RCOM_0225530 | RBR | B9SVY5 | B9SVG9 | E2F4,5, putative. | Retinoblastoma-related protein; Regulator of biological processes that recruits a histone deacetylase to control gene transcription. May play a role in the entry into mitosis, negatively regulating the cell proliferation. Formation of stable complexes with geminiviridae replication-associated proteins may create a cellular environment which favors viral DNA replication (By similarity); Belongs to the retinoblastoma protein (RB) family. | 0.963 |
| RCOM_0225530 | RCOM_0680380 | B9SVY5 | B9RT24 | E2F4,5, putative. | Always early, putative. | 0.883 |
| RCOM_0225530 | RCOM_0897930 | B9SVY5 | B9RV08 | E2F4,5, putative. | Tso1, putative. | 0.701 |
| RCOM_0225530 | RCOM_1354870 | B9SVY5 | B9S0H1 | E2F4,5, putative. | Transcription factor Dp-1, putative; Involved in the regulation of the G1/S transition. Increases the DNA binding activity of E2F proteins after heterodimerization. Belongs to the E2F/DP family. | 0.985 |
| RCOM_0225530 | RCOM_1431990 | B9SVY5 | B9RF70 | E2F4,5, putative. | Always early, putative. | 0.883 |
| RCOM_0225530 | RCOM_1444020 | B9SVY5 | B9RGU7 | E2F4,5, putative. | RB_A domain-containing protein. | 0.963 |
| RCOM_0225530 | RCOM_1515380 | B9SVY5 | B9SDA2 | E2F4,5, putative. | Heterochromatin protein, putative. | 0.781 |
| RCOM_0267720 | RCOM_1354870 | B9SX99 | B9S0H1 | TFIIH basal transcription factor complex subunit, putative. | Transcription factor Dp-1, putative; Involved in the regulation of the G1/S transition. Increases the DNA binding activity of E2F proteins after heterodimerization. Belongs to the E2F/DP family. | 0.838 |
| RCOM_0680380 | RBR | B9RT24 | B9SVG9 | Always early, putative. | Retinoblastoma-related protein; Regulator of biological processes that recruits a histone deacetylase to control gene transcription. May play a role in the entry into mitosis, negatively regulating the cell proliferation. Formation of stable complexes with geminiviridae replication-associated proteins may create a cellular environment which favors viral DNA replication (By similarity); Belongs to the retinoblastoma protein (RB) family. | 0.918 |
| RCOM_0680380 | RCOM_0225530 | B9RT24 | B9SVY5 | Always early, putative. | E2F4,5, putative. | 0.883 |
| RCOM_0680380 | RCOM_0897930 | B9RT24 | B9RV08 | Always early, putative. | Tso1, putative. | 0.778 |
| RCOM_0680380 | RCOM_1354870 | B9RT24 | B9S0H1 | Always early, putative. | Transcription factor Dp-1, putative; Involved in the regulation of the G1/S transition. Increases the DNA binding activity of E2F proteins after heterodimerization. Belongs to the E2F/DP family. | 0.881 |
| RCOM_0680380 | RCOM_1444020 | B9RT24 | B9RGU7 | Always early, putative. | RB_A domain-containing protein. | 0.918 |
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