STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCOM_0866920Mixed-lineage leukemia protein, mll, putative. (1125 aa)    
Predicted Functional Partners:
RCOM_1578640
B30.2/SPRY domain-containing protein.
    
 0.886
RCOM_0862780
Nucleotide binding protein, putative.
    
 0.886
RCOM_0461620
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.790
RCOM_0320940
Uncharacterized protein.
    
 0.787
RCOM_1063980
COMPASS component SWD2, putative.
   
 
 0.637
RCOM_0017350
COMPASS component SWD2, putative.
   
 
 0.637
RCOM_0293400
Ubiquitin, putative.
    
  0.628
RCOM_0263520
Uncharacterized protein.
   
 0.610
RCOM_0292310
Histone H3; Belongs to the histone H3 family.
   
 0.604
RCOM_1506370
COMM domain-containing protein, putative.
   
 0.604
Your Current Organism:
Ricinus communis
NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.