Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RCOM_0423070 | RCOM_1053560 | B9SDP9 | B9RKU9 | Uncharacterized protein. | Uncharacterized protein. | 0.420 |
RCOM_0423070 | RCOM_1535280 | B9SDP9 | B9S2Z4 | Uncharacterized protein. | Glycosyltransferase, putative. | 0.419 |
RCOM_0819440 | RCOM_1535280 | B9SGQ5 | B9S2Z4 | Glycosyltransferases; Involved in the synthesis of glucuronoxylan hemicellulose in secondary cell walls; Belongs to the glycosyltransferase 43 family. | Glycosyltransferase, putative. | 0.408 |
RCOM_1053560 | RCOM_0423070 | B9RKU9 | B9SDP9 | Uncharacterized protein. | Uncharacterized protein. | 0.420 |
RCOM_1053560 | RCOM_1535280 | B9RKU9 | B9S2Z4 | Uncharacterized protein. | Glycosyltransferase, putative. | 0.440 |
RCOM_1535280 | RCOM_0423070 | B9S2Z4 | B9SDP9 | Glycosyltransferase, putative. | Uncharacterized protein. | 0.419 |
RCOM_1535280 | RCOM_0819440 | B9S2Z4 | B9SGQ5 | Glycosyltransferase, putative. | Glycosyltransferases; Involved in the synthesis of glucuronoxylan hemicellulose in secondary cell walls; Belongs to the glycosyltransferase 43 family. | 0.408 |
RCOM_1535280 | RCOM_1053560 | B9S2Z4 | B9RKU9 | Glycosyltransferase, putative. | Uncharacterized protein. | 0.440 |