STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCOM_0990740Calcium-transporting ATPase; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium. (985 aa)    
Predicted Functional Partners:
RCOM_0104810
Heat shock protein, putative.
     
 0.618
RCOM_0804060
Sulfate transporter, putative.
      
 0.610
RCOM_1601690
Glutamate receptor; Glutamate-gated receptor that probably acts as non-selective cation channel; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.
   
  
 0.584
RCOM_0487060
Glutamate receptor; Glutamate-gated receptor that probably acts as non-selective cation channel; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.
   
  
 0.567
RCOM_0437770
Uncharacterized protein.
      
 0.548
RCOM_1688100
Heat shock protein, putative.
     
 0.541
RCOM_1582180
Heat shock protein, putative.
     
 0.541
RCOM_1503060
Calnexin, putative.
    
 
 0.524
RCOM_1434770
Calreticulin.
      
 0.508
RCOM_1302920
ATP binding protein, putative.
   
  
 0.506
Your Current Organism:
Ricinus communis
NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.