STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCOM_0653440Charged multivesicular body protein 2a, putative. (224 aa)    
Predicted Functional Partners:
RCOM_1485760
Chmp1, putative.
   
0.985
RCOM_0474030
Neuroendocrine differentiation factor, putative.
   
 0.976
RCOM_1048510
Charged multivesicular body protein 4b, putative.
   
 0.969
RCOM_0053910
Charged multivesicular body protein, putative.
   
 0.941
RCOM_1305670
Charged multivesicular body protein, putative.
  
 0.925
RCOM_0904150
Vacuolar protein sorting protein, putative.
    
 0.907
RCOM_0585710
Vacuolar protein sorting-associated protein; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family.
   
 0.906
RCOM_1343110
Protein CHMP7, putative.
    
 0.898
RCOM_1063030
Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.
   
 0.893
RCOM_1352800
VPS37 C-terminal domain-containing protein.
    
 0.887
Your Current Organism:
Ricinus communis
NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.