STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCOM_1062430Protein C20orf11, putative. (287 aa)    
Predicted Functional Partners:
RCOM_0744890
Erythroblast macrophage protein emp, putative.
  
 
 
0.924
RCOM_1334240
Uncharacterized protein.
   
 
0.919
RCOM_1578190
Uncharacterized protein.
    
 
 0.918
RCOM_0452240
Uncharacterized protein.
    
 
 0.911
RCOM_0187760
Sporulation protein RMD5, putative.
  
 
 
 0.870
RCOM_0817000
Sporulation protein RMD5, putative.
  
 
 
 0.869
RCOM_1454380
Uncharacterized protein.
    
 
 0.738
RCOM_1454530
WD-repeat protein, putative.
    
 
 0.738
RCOM_0996060
WD-repeat protein, putative.
    
 
 0.738
RCOM_0918390
Uncharacterized protein.
      
 0.505
Your Current Organism:
Ricinus communis
NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.