STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCOM_0601590Nucleotide binding protein, putative. (1594 aa)    
Predicted Functional Partners:
RCOM_1642670
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
    
 
 0.652
RCOM_1678570
Uncharacterized protein.
  
 
 
 0.577
RCOM_1508680
Zinc ion binding protein, putative.
      
 0.521
RCOM_1584910
Uncharacterized protein.
      
 0.518
RCOM_0192760
Vesicle-associated membrane protein, putative.
      
 0.517
RCOM_0272140
Uncharacterized protein.
      
 0.515
RCOM_1597810
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
      
 0.509
RCOM_0856160
Vacuolar protein sorting-associated protein, putative.
  
     0.509
RCOM_0799000
Uncharacterized protein.
  
     0.494
RCOM_1725910
Uncharacterized protein.
  
     0.488
Your Current Organism:
Ricinus communis
NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean
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