STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCOM_0651000Homeobox domain-containing protein. (162 aa)    
Predicted Functional Partners:
RCOM_1076570
LOB domain-containing protein.
  
     0.489
RCOM_0531220
CCT domain-containing protein.
  
     0.459
RCOM_0173590
Zinc finger protein, putative.
  
     0.443
RCOM_1431030
Uncharacterized protein.
  
     0.424
RCOM_1576950
ETHYLENE-INSENSITIVE3 protein, putative.
  
     0.420
RCOM_1338750
BRASSINAZOLE-RESISTANT 1 protein, putative.
  
     0.420
RCOM_0536100
Transcription factor, putative.
  
     0.412
RCOM_0147060
Uncharacterized protein.
  
     0.408
RCOM_1052250
Uncharacterized protein.
  
     0.406
Your Current Organism:
Ricinus communis
NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.