STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCOM_0701550Structural constituent of ribosome, putative. (162 aa)    
Predicted Functional Partners:
RCOM_1032150
Translation initiation factor if-3, putative.
  
 
 0.999
RCOM_1251830
Preprotein translocase secy subunit, putative; Belongs to the SecY/SEC61-alpha family.
   
 
 0.999
RCOM_0602110
50S ribosomal protein L25, putative.
  
 
 0.999
RCOM_0546740
Trigger factor, putative.
   
 
 0.999
rps12
Ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family.
  
 0.999
RCOM_0679160
Structural constituent of ribosome, putative.
  
 
 0.998
RCOM_1593360
Ribosomal protein S9, putative; Belongs to the universal ribosomal protein uS9 family.
   
 0.997
RCOM_1499710
40S ribosomal protein S20, putative.
  
 0.997
RCOM_1582880
Ribosomal protein S9, putative.
   
 0.997
RCOM_0521090
30S ribosomal protein S10, putative.
  
 0.997
Your Current Organism:
Ricinus communis
NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.