STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCOM_1516680Calcium ion binding protein, putative. (165 aa)    
Predicted Functional Partners:
RCOM_0843760
Uncharacterized protein.
  
     0.472
RCOM_0689680
Reticulon-like protein.
  
     0.470
RCOM_1183370
LEA_2 domain-containing protein.
  
     0.460
RCOM_0898880
Uncharacterized protein.
  
     0.447
RCOM_0935920
Stem-specific protein TSJT1, putative.
  
     0.442
RCOM_1930180
Uncharacterized protein.
  
     0.420
RCOM_1439720
Uncharacterized protein.
  
     0.403
Your Current Organism:
Ricinus communis
NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.