Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RCOM_0353720 | RCOM_0713160 | B9ST26 | B9SUM7 | Transcription factor HBP-1b(C1), putative. | LOB domain-containing protein. | 0.521 |
RCOM_0353720 | RCOM_0924530 | B9ST26 | B9RP67 | Transcription factor HBP-1b(C1), putative. | Cellulose synthase; Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily. | 0.520 |
RCOM_0353720 | RCOM_0959480 | B9ST26 | B9SE80 | Transcription factor HBP-1b(C1), putative. | Cellulose synthase; Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily. | 0.533 |
RCOM_0353720 | RCOM_0963180 | B9ST26 | B9RVJ1 | Transcription factor HBP-1b(C1), putative. | Uncharacterized protein. | 0.528 |
RCOM_0353720 | RCOM_0963400 | B9ST26 | B9RVJ3 | Transcription factor HBP-1b(C1), putative. | Uncharacterized protein. | 0.528 |
RCOM_0353720 | RCOM_1134940 | B9ST26 | B9RVF1 | Transcription factor HBP-1b(C1), putative. | LOB domain-containing protein, putative. | 0.509 |
RCOM_0353720 | RCOM_1267480 | B9ST26 | B9SSW7 | Transcription factor HBP-1b(C1), putative. | Serine-threonine protein kinase, plant-type, putative. | 0.534 |
RCOM_0353720 | RCOM_1355740 | B9ST26 | B9S0K8 | Transcription factor HBP-1b(C1), putative. | Cyclic nucleotide-binding domain-containing protein. | 0.527 |
RCOM_0353720 | RCOM_1586640 | B9ST26 | B9R6W9 | Transcription factor HBP-1b(C1), putative. | Delta 1-pyrroline-5-carboxylate synthetase, putative. | 0.444 |
RCOM_0353720 | RCOM_1754260 | B9ST26 | B9RJ10 | Transcription factor HBP-1b(C1), putative. | Uncharacterized protein. | 0.496 |
RCOM_0713160 | RCOM_0353720 | B9SUM7 | B9ST26 | LOB domain-containing protein. | Transcription factor HBP-1b(C1), putative. | 0.521 |
RCOM_0713160 | RCOM_0924530 | B9SUM7 | B9RP67 | LOB domain-containing protein. | Cellulose synthase; Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily. | 0.525 |
RCOM_0713160 | RCOM_0959480 | B9SUM7 | B9SE80 | LOB domain-containing protein. | Cellulose synthase; Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily. | 0.529 |
RCOM_0713160 | RCOM_0963180 | B9SUM7 | B9RVJ1 | LOB domain-containing protein. | Uncharacterized protein. | 0.543 |
RCOM_0713160 | RCOM_0963400 | B9SUM7 | B9RVJ3 | LOB domain-containing protein. | Uncharacterized protein. | 0.543 |
RCOM_0713160 | RCOM_1267480 | B9SUM7 | B9SSW7 | LOB domain-containing protein. | Serine-threonine protein kinase, plant-type, putative. | 0.536 |
RCOM_0713160 | RCOM_1355740 | B9SUM7 | B9S0K8 | LOB domain-containing protein. | Cyclic nucleotide-binding domain-containing protein. | 0.541 |
RCOM_0713160 | RCOM_1586640 | B9SUM7 | B9R6W9 | LOB domain-containing protein. | Delta 1-pyrroline-5-carboxylate synthetase, putative. | 0.531 |
RCOM_0713160 | RCOM_1754260 | B9SUM7 | B9RJ10 | LOB domain-containing protein. | Uncharacterized protein. | 0.493 |
RCOM_0924530 | RCOM_0353720 | B9RP67 | B9ST26 | Cellulose synthase; Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily. | Transcription factor HBP-1b(C1), putative. | 0.520 |
page 1 of 6