Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RCOM_0265980 | RCOM_0879800 | B9SWA7 | B9SG94 | Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family. | Uncharacterized protein. | 0.498 |
RCOM_0879800 | RCOM_0265980 | B9SG94 | B9SWA7 | Uncharacterized protein. | Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family. | 0.498 |
RCOM_0879800 | RCOM_1032820 | B9SG94 | B9RJB1 | Uncharacterized protein. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.566 |
RCOM_0879800 | RCOM_1192240 | B9SG94 | B9S300 | Uncharacterized protein. | 4-hydroxyphenylpyruvate dioxygenase. | 0.596 |
RCOM_0879800 | RCOM_1217310 | B9SG94 | B9SQS5 | Uncharacterized protein. | 3-isopropylmalate dehydratase, putative. | 0.492 |
RCOM_0879800 | RCOM_1217320 | B9SG94 | B9SQS6 | Uncharacterized protein. | 3-isopropylmalate dehydratase, putative. | 0.492 |
RCOM_0879800 | RCOM_1267040 | B9SG94 | B9SX30 | Uncharacterized protein. | Isopropylmalate synthase, putative. | 0.495 |
RCOM_0879800 | RCOM_1389110 | B9SG94 | B9SXE3 | Uncharacterized protein. | 3-isopropylmalate dehydratase, putative. | 0.492 |
RCOM_0879800 | RCOM_1410590 | B9SG94 | B9SCB4 | Uncharacterized protein. | Myosin-9, putative. | 0.492 |
RCOM_0879800 | RCOM_1437460 | B9SG94 | B9RFU9 | Uncharacterized protein. | Uncharacterized protein. | 0.491 |
RCOM_0879800 | RCOM_1743950 | B9SG94 | B9RXB8 | Uncharacterized protein. | Homogentisate 1,2-dioxygenase, putative. | 0.819 |
RCOM_1032820 | RCOM_0879800 | B9RJB1 | B9SG94 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Uncharacterized protein. | 0.566 |
RCOM_1032820 | RCOM_1743950 | B9RJB1 | B9RXB8 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Homogentisate 1,2-dioxygenase, putative. | 0.521 |
RCOM_1192240 | RCOM_0879800 | B9S300 | B9SG94 | 4-hydroxyphenylpyruvate dioxygenase. | Uncharacterized protein. | 0.596 |
RCOM_1192240 | RCOM_1743950 | B9S300 | B9RXB8 | 4-hydroxyphenylpyruvate dioxygenase. | Homogentisate 1,2-dioxygenase, putative. | 0.999 |
RCOM_1217310 | RCOM_0879800 | B9SQS5 | B9SG94 | 3-isopropylmalate dehydratase, putative. | Uncharacterized protein. | 0.492 |
RCOM_1217310 | RCOM_1267040 | B9SQS5 | B9SX30 | 3-isopropylmalate dehydratase, putative. | Isopropylmalate synthase, putative. | 0.989 |
RCOM_1217310 | RCOM_1389110 | B9SQS5 | B9SXE3 | 3-isopropylmalate dehydratase, putative. | 3-isopropylmalate dehydratase, putative. | 0.967 |
RCOM_1217320 | RCOM_0879800 | B9SQS6 | B9SG94 | 3-isopropylmalate dehydratase, putative. | Uncharacterized protein. | 0.492 |
RCOM_1217320 | RCOM_1267040 | B9SQS6 | B9SX30 | 3-isopropylmalate dehydratase, putative. | Isopropylmalate synthase, putative. | 0.899 |
page 1 of 2