STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCOM_1090900Auxin:hydrogen symporter, putative. (451 aa)    
Predicted Functional Partners:
RCOM_1614520
Malic enzyme.
  
  
 0.459
RCOM_1049930
Malic enzyme.
  
  
 0.459
RCOM_1489870
Malic enzyme.
  
  
 0.459
RCOM_0801560
Malic enzyme.
  
  
 0.459
RCOM_0658870
Malic enzyme.
  
  
 0.459
RCOM_1879130
Malic enzyme, putative.
  
  
 0.459
RCOM_1803350
Malic domain-containing protein.
  
  
 0.459
RCOM_0688710
Amino acid transporter, putative.
  
   
 0.445
RCOM_1626850
Uncharacterized protein.
  
     0.418
RCOM_1437510
Auxin efflux carrier component; May act as a component of the auxin efflux carrier. Belongs to the auxin efflux carrier (TC 2.A.69.1) family.
      
 0.414
Your Current Organism:
Ricinus communis
NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.