STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCOM_0618070Uncharacterized protein. (71 aa)    
Predicted Functional Partners:
RCOM_1454570
Transcription elongation factor SPT4 homolog; May regulate transcription elongation by RNA polymerase II. May enhance transcriptional pausing at sites proximal to the promoter, which may in turn facilitate the assembly of an elongation competent RNA polymerase II complex; Belongs to the SPT4 family.
    
 0.792
RCOM_1432330
Cyclin h, putative; Belongs to the cyclin family.
     
 0.787
RCOM_0243690
Cak1, putative; Belongs to the protein kinase superfamily.
     
 0.787
RCOM_0811900
DNA-directed RNA polymerase II subunit, putative.
   
 
 0.726
RCOM_1416940
G1/s-specific cyclin C, putative; Belongs to the cyclin family.
     
 0.720
RCOM_1312220
Cdk8, putative; Belongs to the protein kinase superfamily.
    
 0.717
RCOM_1496830
DNA-directed RNA polymerase subunit rpb6, putative.
     
 0.701
RCOM_1370030
Protein SSU72, putative.
   
 
 0.697
RCOM_1752370
Uncharacterized protein.
  
 
 0.695
RCOM_0809440
Uncharacterized protein.
   
 
 0.691
Your Current Organism:
Ricinus communis
NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.