STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCOM_0384200Dehydration-responsive element-binding protein 1B, putative. (186 aa)    
Predicted Functional Partners:
RCOM_1015170
Dof-type domain-containing protein.
  
     0.460
RcWRI1
AP2-type transcription factor.
  
     0.458
RCOM_1592450
Zinc finger protein, putative.
  
     0.454
RCOM_1608530
AP2/ERF domain-containing protein.
  
     0.453
RCOM_0716180
Dof-type domain-containing protein.
  
     0.443
RCOM_0003540
Protein translocase, putative.
  
     0.443
RCOM_0603270
Zinc finger protein, putative.
  
     0.426
RCOM_0522470
Ribosomal RNA small subunit methyltransferase B, putative; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
      
 0.410
RCOM_1493780
Photosystem I reaction center subunit VI, chloroplast, putative.
  
     0.406
Your Current Organism:
Ricinus communis
NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.