Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RCOM_0112320 | RCOM_0383010 | B9SR90 | B9SRG9 | Nnp-1 protein, putative. | Brix domain containing protein, putative. | 0.991 |
RCOM_0112320 | RCOM_0526890 | B9SR90 | B9SJF2 | Nnp-1 protein, putative. | Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family. | 0.991 |
RCOM_0112320 | RCOM_1064130 | B9SR90 | B9S643 | Nnp-1 protein, putative. | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | 0.984 |
RCOM_0112320 | RCOM_1178180 | B9SR90 | B9SAR5 | Nnp-1 protein, putative. | Protein Peter pan, putative. | 0.993 |
RCOM_0112320 | RCOM_1327280 | B9SR90 | B9S245 | Nnp-1 protein, putative. | U3 small nucleolar RNA-associated protein, putative. | 0.927 |
RCOM_0112320 | RCOM_1353350 | B9SR90 | B9S0D0 | Nnp-1 protein, putative. | WD-repeat protein, putative. | 0.809 |
RCOM_0112320 | RCOM_1374490 | B9SR90 | B9SSN3 | Nnp-1 protein, putative. | Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. | 0.997 |
RCOM_0112320 | RCOM_1412310 | B9SR90 | B9SRK3 | Nnp-1 protein, putative. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.947 |
RCOM_0112320 | RCOM_1506850 | B9SR90 | B9RAJ5 | Nnp-1 protein, putative. | WD-repeat protein, putative. | 0.996 |
RCOM_0383010 | RCOM_0112320 | B9SRG9 | B9SR90 | Brix domain containing protein, putative. | Nnp-1 protein, putative. | 0.991 |
RCOM_0383010 | RCOM_0526890 | B9SRG9 | B9SJF2 | Brix domain containing protein, putative. | Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family. | 0.995 |
RCOM_0383010 | RCOM_0859910 | B9SRG9 | B9SX92 | Brix domain containing protein, putative. | Dead box ATP-dependent RNA helicase, putative. | 0.994 |
RCOM_0383010 | RCOM_1064130 | B9SRG9 | B9S643 | Brix domain containing protein, putative. | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | 0.992 |
RCOM_0383010 | RCOM_1178180 | B9SRG9 | B9SAR5 | Brix domain containing protein, putative. | Protein Peter pan, putative. | 0.975 |
RCOM_0383010 | RCOM_1327280 | B9SRG9 | B9S245 | Brix domain containing protein, putative. | U3 small nucleolar RNA-associated protein, putative. | 0.926 |
RCOM_0383010 | RCOM_1353350 | B9SRG9 | B9S0D0 | Brix domain containing protein, putative. | WD-repeat protein, putative. | 0.918 |
RCOM_0383010 | RCOM_1374490 | B9SRG9 | B9SSN3 | Brix domain containing protein, putative. | Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. | 0.999 |
RCOM_0383010 | RCOM_1412310 | B9SRG9 | B9SRK3 | Brix domain containing protein, putative. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.999 |
RCOM_0383010 | RCOM_1506850 | B9SRG9 | B9RAJ5 | Brix domain containing protein, putative. | WD-repeat protein, putative. | 0.987 |
RCOM_0526890 | RCOM_0112320 | B9SJF2 | B9SR90 | Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family. | Nnp-1 protein, putative. | 0.991 |
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