STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCOM_1016740Condensin complex subunit, putative. (584 aa)    
Predicted Functional Partners:
RCOM_0100760
Structural maintenance of chromosomes protein.
  
 0.995
RCOM_0248620
Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases.
   
 0.994
RCOM_1500520
Structural maintenance of chromosomes protein.
   
 0.993
RCOM_0388730
Structural maintenance of chromosomes smc, bacterial, putative.
   
 0.993
RCOM_0132750
Cnd3 domain-containing protein.
   
 0.990
RCOM_0132760
Cnd3 domain-containing protein.
   
 0.990
RCOM_0963890
Structural maintenance of chromosomes 5 smc5, putative.
   
 0.913
RCOM_0573510
Structural maintenance of chromosomes protein.
   
 0.910
RCOM_0731060
DUF641 domain-containing protein.
   
 0.878
RCOM_0499140
Structural maintenance of chromosomes protein.
   
 0.878
Your Current Organism:
Ricinus communis
NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.