STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCOM_0982250Zeamatin, putative. (254 aa)    
Predicted Functional Partners:
RCOM_1217840
Calcium ion binding protein, putative.
   
 0.562
RCOM_1577810
Sulfite reductase [ferredoxin], putative.
      
 0.546
RCOM_0572620
TPR_REGION domain-containing protein.
   
  
 0.537
RCOM_1356070
V-type proton ATPase subunit G; Catalytic subunit of the peripheral V1 complex of vacuolar ATPase (V-ATPase). V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.
     
 0.528
RCOM_0228830
V-type proton ATPase subunit G; Catalytic subunit of the peripheral V1 complex of vacuolar ATPase (V-ATPase). V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.
     
 0.528
RCOM_1013130
Calmodulin, putative.
      
 0.505
RCOM_0604210
STS14 protein, putative.
   
  
 0.493
RCOM_0679690
Tubby-like F-box protein; Belongs to the TUB family.
      
 0.487
RCOM_0540790
L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily.
    
 
 0.438
RCOM_0540800
L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily.
    
 
 0.438
Your Current Organism:
Ricinus communis
NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean
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