Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RCOM_0228830 | RCOM_0982250 | B9SUA9 | B9SZE5 | V-type proton ATPase subunit G; Catalytic subunit of the peripheral V1 complex of vacuolar ATPase (V-ATPase). V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. | Zeamatin, putative. | 0.528 |
RCOM_0228830 | RCOM_1217840 | B9SUA9 | B9SQU8 | V-type proton ATPase subunit G; Catalytic subunit of the peripheral V1 complex of vacuolar ATPase (V-ATPase). V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. | Calcium ion binding protein, putative. | 0.405 |
RCOM_0228830 | RCOM_1356070 | B9SUA9 | B9S0M1 | V-type proton ATPase subunit G; Catalytic subunit of the peripheral V1 complex of vacuolar ATPase (V-ATPase). V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. | V-type proton ATPase subunit G; Catalytic subunit of the peripheral V1 complex of vacuolar ATPase (V-ATPase). V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. | 0.901 |
RCOM_0540790 | RCOM_0540800 | B9SIT3 | B9SIT4 | L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily. | L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily. | 0.900 |
RCOM_0540790 | RCOM_0982250 | B9SIT3 | B9SZE5 | L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily. | Zeamatin, putative. | 0.438 |
RCOM_0540790 | RCOM_1577810 | B9SIT3 | B9RIC6 | L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily. | Sulfite reductase [ferredoxin], putative. | 0.790 |
RCOM_0540800 | RCOM_0540790 | B9SIT4 | B9SIT3 | L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily. | L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily. | 0.900 |
RCOM_0540800 | RCOM_0982250 | B9SIT4 | B9SZE5 | L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily. | Zeamatin, putative. | 0.438 |
RCOM_0540800 | RCOM_1577810 | B9SIT4 | B9RIC6 | L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily. | Sulfite reductase [ferredoxin], putative. | 0.790 |
RCOM_0572620 | RCOM_0982250 | B9SUH4 | B9SZE5 | TPR_REGION domain-containing protein. | Zeamatin, putative. | 0.537 |
RCOM_0572620 | RCOM_1013130 | B9SUH4 | B9S960 | TPR_REGION domain-containing protein. | Calmodulin, putative. | 0.408 |
RCOM_0604210 | RCOM_0982250 | B9S8S2 | B9SZE5 | STS14 protein, putative. | Zeamatin, putative. | 0.493 |
RCOM_0679690 | RCOM_0982250 | B9RSZ5 | B9SZE5 | Tubby-like F-box protein; Belongs to the TUB family. | Zeamatin, putative. | 0.487 |
RCOM_0982250 | RCOM_0228830 | B9SZE5 | B9SUA9 | Zeamatin, putative. | V-type proton ATPase subunit G; Catalytic subunit of the peripheral V1 complex of vacuolar ATPase (V-ATPase). V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. | 0.528 |
RCOM_0982250 | RCOM_0540790 | B9SZE5 | B9SIT3 | Zeamatin, putative. | L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily. | 0.438 |
RCOM_0982250 | RCOM_0540800 | B9SZE5 | B9SIT4 | Zeamatin, putative. | L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily. | 0.438 |
RCOM_0982250 | RCOM_0572620 | B9SZE5 | B9SUH4 | Zeamatin, putative. | TPR_REGION domain-containing protein. | 0.537 |
RCOM_0982250 | RCOM_0604210 | B9SZE5 | B9S8S2 | Zeamatin, putative. | STS14 protein, putative. | 0.493 |
RCOM_0982250 | RCOM_0679690 | B9SZE5 | B9RSZ5 | Zeamatin, putative. | Tubby-like F-box protein; Belongs to the TUB family. | 0.487 |
RCOM_0982250 | RCOM_1013130 | B9SZE5 | B9S960 | Zeamatin, putative. | Calmodulin, putative. | 0.505 |
page 1 of 2