STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCOM_0510090Scythe/bat3, putative. (709 aa)    
Predicted Functional Partners:
RCOM_1068280
Uncharacterized protein.
    
 0.960
RCOM_1032270
Heat shock protein 70 (HSP70)-interacting protein, putative.
   
 0.787
RCOM_1600180
Scythe/bat3, putative.
  
  
 
0.580
RCOM_1613490
ATPase; ATPase required for the post-translational delivery of tail- anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail-anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for insertion. Subseq [...]
    
 0.557
RCOM_0561320
TPR_REGION domain-containing protein.
   
 0.557
RCOM_0545340
Arsenical pump-driving atpase, putative.
    
 0.557
RCOM_0481370
Arsenical pump-driving atpase, putative.
    
 0.557
RCOM_0873810
Plant ubiquilin, putative.
   
0.540
RCOM_0911990
Prefoldin subunit, putative.
      
 0.523
RCOM_1678560
26S proteasome regulatory subunit S3, putative.
      
 0.521
Your Current Organism:
Ricinus communis
NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.