STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCOM_0639960Formin-like protein; Belongs to the formin-like family. (1170 aa)    
Predicted Functional Partners:
RCOM_0918870
Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
    
 0.656
RCOM_0838580
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
   
 
  0.562
RCOM_0497290
Uncharacterized protein.
  
 
  0.540
RCOM_2088240
Uncharacterized protein.
  
   
 0.503
RCOM_0613750
Calmodulin binding protein, putative; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
     
 0.495
RCOM_0557530
ATP binding protein, putative.
   
  0.477
RCOM_1465980
Uncharacterized protein.
    
 0.455
RCOM_0205120
Uncharacterized protein.
    
 0.455
RCOM_2050800
Uncharacterized protein.
  
     0.455
RCOM_1502780
Uncharacterized protein.
  
  
  0.443
Your Current Organism:
Ricinus communis
NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.