STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCOM_0279620Uncharacterized protein. (191 aa)    
Predicted Functional Partners:
RCOM_0634170
Purine transporter, putative.
  
 
  0.520
RCOM_0497920
Uncharacterized protein.
  
     0.518
RCOM_1854670
FAS1 domain-containing protein.
  
 
  0.517
RCOM_0658850
ATPUP11, putative.
  
 
  0.515
RCOM_0367420
Uncharacterized protein.
  
 
  0.505
RCOM_0518930
Uncharacterized protein.
  
 
  0.504
RCOM_0812860
Uncharacterized protein.
  
     0.502
RCOM_0445500
Uncharacterized protein.
  
     0.501
RCOM_0738940
Uncharacterized protein.
  
 
  0.497
RCOM_1503100
Uncharacterized protein.
  
     0.494
Your Current Organism:
Ricinus communis
NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.