STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCOM_0002720Eukaryotic translation initiation factor 2c, putative. (863 aa)    
Predicted Functional Partners:
RCOM_1511350
Spermidine synthase 1, putative.
      
 0.860
RCOM_0285840
Spermidine synthase 1, putative; Belongs to the spermidine/spermine synthase family.
      
 0.859
RCOM_1579780
Spermidine synthase 1, putative; Belongs to the spermidine/spermine synthase family.
      
 0.858
RCOM_0255520
U4/U6 small nuclear ribonucleoprotein Prp4, putative.
      
 0.854
RCOM_1431630
Xaa-pro aminopeptidase, putative; Belongs to the peptidase M24B family.
      
 0.845
RCOM_1435660
Xaa-pro dipeptidase, putative.
      
 0.845
RCOM_0553210
Xaa-pro aminopeptidase, putative; Belongs to the peptidase M24B family.
      
 0.845
RCOM_1452510
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.825
RCOM_2104770
Uncharacterized protein.
   
 0.825
RCOM_1600980
Starch branching enzyme II, putative.
   
  
 0.823
Your Current Organism:
Ricinus communis
NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.