STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCOM_0376050annotation not available (250 aa)    
Predicted Functional Partners:
RCOM_1445440
Aspartokinase; Belongs to the aspartokinase family.
   
 
 0.804
RCOM_0437060
Anthranilate synthase component II, putative.
   
  
 0.739
RCOM_1909160
Tryptophan biosynthesis protein, trpf, putative.
   
  
 0.739
RCOM_0687850
Prephenate dehydrogenase, putative.
    
 0.721
RCOM_0003340
Prephenate dehydrogenase, putative.
    
 0.721
RCOM_1108890
Homoserine dehydrogenase.
    
 0.663
RCOM_0742100
Aspartate kinase, putative.
    
 0.663
RCOM_1622040
Chorismate mutase, chloroplast, putative.
    
 0.662
RCOM_0920930
Chorismate mutase.
    
 0.662
RCOM_0169190
Chorismate mutase.
    
 0.662
Your Current Organism:
Ricinus communis
NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.