STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCOM_2054790ATPase_AAA_core domain-containing protein. (596 aa)    
Predicted Functional Partners:
RCOM_0353760
ATP-dependent Clp protease adaptor protein clpS, putative.
  
 
 0.731
RCOM_1434170
WD-repeat protein, putative.
    
 
 0.728
RCOM_0673570
Heat shock 70 kDa protein, putative.
  
 
 0.626
RCOM_1445490
ATP-dependent clp protease, putative.
  
     0.520
RCOM_1445500
ATP-dependent clp protease, putative.
  
     0.514
RCOM_1445510
Chaperone clpb, putative.
  
     0.512
RCOM_0584640
Heat-shock protein 105 kDa, putative.
  
 
 0.491
RCOM_0980870
Heat shock 70 kDa protein, putative.
  
 
 0.491
RCOM_0817860
Heat shock protein, putative; Belongs to the heat shock protein 70 family.
  
 
 0.487
RCOM_0759010
Heat shock protein, putative; Belongs to the heat shock protein 70 family.
  
 
 0.487
Your Current Organism:
Ricinus communis
NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean
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