Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RCOM_0174800 | RCOM_1980070 | B9SNC6 | B9TE17 | Sulfhydryl oxidase. | Protein disulfide-isomerase, putative. | 0.402 |
RCOM_0406990 | RCOM_1980070 | B9SU65 | B9TE17 | UDP-glucose glycoprotein:glucosyltransferase, putative. | Protein disulfide-isomerase, putative. | 0.409 |
RCOM_1587650 | RCOM_1980070 | B9R718 | B9TE17 | Uncharacterized protein. | Protein disulfide-isomerase, putative. | 0.402 |
RCOM_1980070 | RCOM_0174800 | B9TE17 | B9SNC6 | Protein disulfide-isomerase, putative. | Sulfhydryl oxidase. | 0.402 |
RCOM_1980070 | RCOM_0406990 | B9TE17 | B9SU65 | Protein disulfide-isomerase, putative. | UDP-glucose glycoprotein:glucosyltransferase, putative. | 0.409 |
RCOM_1980070 | RCOM_1587650 | B9TE17 | B9R718 | Protein disulfide-isomerase, putative. | Uncharacterized protein. | 0.402 |