Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RCOM_1003460 | RCOM_1313080 | B9RZZ7 | B9RYS5 | Squamosa promoter-binding protein, putative. | Stellacyanin, putative. | 0.424 |
RCOM_1003460 | RCOM_1596670 | B9RZZ7 | B9R850 | Squamosa promoter-binding protein, putative. | DNA binding protein, putative. | 0.457 |
RCOM_1225970 | RCOM_1596670 | B9SFR9 | B9R850 | WRKY transcription factor, putative. | DNA binding protein, putative. | 0.437 |
RCOM_1252040 | RCOM_1596670 | B9S8F2 | B9R850 | BRASSINAZOLE-RESISTANT 2 protein, putative. | DNA binding protein, putative. | 0.405 |
RCOM_1313080 | RCOM_1003460 | B9RYS5 | B9RZZ7 | Stellacyanin, putative. | Squamosa promoter-binding protein, putative. | 0.424 |
RCOM_1313080 | RCOM_1596670 | B9RYS5 | B9R850 | Stellacyanin, putative. | DNA binding protein, putative. | 0.401 |
RCOM_1596670 | RCOM_1003460 | B9R850 | B9RZZ7 | DNA binding protein, putative. | Squamosa promoter-binding protein, putative. | 0.457 |
RCOM_1596670 | RCOM_1225970 | B9R850 | B9SFR9 | DNA binding protein, putative. | WRKY transcription factor, putative. | 0.437 |
RCOM_1596670 | RCOM_1252040 | B9R850 | B9S8F2 | DNA binding protein, putative. | BRASSINAZOLE-RESISTANT 2 protein, putative. | 0.405 |
RCOM_1596670 | RCOM_1313080 | B9R850 | B9RYS5 | DNA binding protein, putative. | Stellacyanin, putative. | 0.401 |