STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCOM_0530930ATP synthase mitochondrial F1 complex assembly factor 2, mitochondrial, putative. (334 aa)    
Predicted Functional Partners:
RCOM_1012880
Chaperone atp11p, putative.
   
 
 0.815
RCOM_0714600
Uncharacterized protein.
   
  
 0.688
RCOM_0491970
Uncharacterized protein; Belongs to the actin family.
   
 
 0.625
RCOM_0531760
Mitochondrial inner membrane protease ATP23; Belongs to the peptidase M76 family.
   
 
 0.600
RCOM_1500910
Autophagy-related protein 3.
      
 0.555
RCOM_0365260
Cysteine protease.
      
 0.550
RCOM_1014720
Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for autophagy.
      
 0.546
RCOM_1507840
Protein tipD, putative.
      
 0.538
RCOM_0731400
Mitochondrial import inner membrane translocase subunit tim10, putative.
   
  
 0.538
RCOM_1604350
Autophagy protein 5; Required for autophagy.
    
 
 0.534
Your Current Organism:
Ricinus communis
NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.