STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCOM_1440580Serine/threonine protein kinase, putative. (1006 aa)    
Predicted Functional Partners:
RCOM_1345500
ADP-ribosylation factor, arf, putative; Belongs to the small GTPase superfamily. Arf family.
   
 0.625
RCOM_1037090
14-3-3 protein, putative; Belongs to the 14-3-3 family.
    
 0.556
RCOM_1437130
Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region.
    
 0.537
RCOM_1000590
Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region.
    
 0.532
RCOM_1698650
Uvb-resistance protein uvr8, putative.
   
 
 0.530
RCOM_1030930
Photosystem II 22 kDa protein, chloroplast, putative.
   
  
 0.528
RCOM_0897900
DNA photolyase, putative.
      
 0.526
RCOM_0002700
Ubiquitin ligase protein cop1, putative.
    
 
 0.524
RCOM_1677000
Ribonucleoside-diphosphate reductase small chain, putative.
      
 0.523
RCOM_0380000
Kinase, putative; Belongs to the protein kinase superfamily.
    
 0.515
Your Current Organism:
Ricinus communis
NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.