Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OAK51583.1 | OAK51584.1 | A3K89_11715 | A3K89_11720 | Ubiquinone biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.524 |
OAK51583.1 | OAK51585.1 | A3K89_11715 | A3K89_11725 | Ubiquinone biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.499 |
OAK51583.1 | OAK51755.1 | A3K89_11715 | A3K89_10810 | Ubiquinone biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.541 |
OAK51583.1 | OAK52387.1 | A3K89_11715 | A3K89_05970 | Ubiquinone biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.468 |
OAK51583.1 | hemA | A3K89_11715 | A3K89_23725 | Ubiquinone biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.429 |
OAK51584.1 | OAK51583.1 | A3K89_11720 | A3K89_11715 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Ubiquinone biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.524 |
OAK51584.1 | OAK51585.1 | A3K89_11720 | A3K89_11725 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.762 |
OAK51585.1 | OAK51583.1 | A3K89_11725 | A3K89_11715 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ubiquinone biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.499 |
OAK51585.1 | OAK51584.1 | A3K89_11725 | A3K89_11720 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.762 |
OAK51755.1 | OAK51583.1 | A3K89_10810 | A3K89_11715 | Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ubiquinone biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.541 |
OAK52387.1 | OAK51583.1 | A3K89_05970 | A3K89_11715 | Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ubiquinone biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.468 |
hemA | OAK51583.1 | A3K89_23725 | A3K89_11715 | glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | Ubiquinone biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.429 |