STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OAK51303.1OHCU decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (148 aa)    
Predicted Functional Partners:
OAK51242.1
Hydroxyisourate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
OAK51243.1
Urate oxidase; Catalyzes the oxidation of uric acid to 5-hydroxyisourate, which is further processed to form (S)-allantoin.
 
  
 0.979
alc
Enterochelin esterase; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the allantoicase family.
 
  0.966
OAK51064.1
Asp/Glu racemase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.905
OAK52744.1
Allantoinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.840
OAK51241.1
Xanthine permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.785
OAK51326.1
Aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HpcH/HpaI aldolase family.
 
     0.781
OAK51246.1
Aldehyde oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.774
OAK51240.1
Molybdopterin-guanine dinucleotide biosynthesis protein MobA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.739
OAK51160.1
Hydantoinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.732
Your Current Organism:
Rhodococcus kyotonensis
NCBI taxonomy Id: 398843
Other names: CCTCC AB206088, IAM 15415, JCM 23211, R. kyotonensis, Rhodococcus kyotonensis Li et al. 2007, strain DS472
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.