STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OAK55463.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (131 aa)    
Predicted Functional Partners:
OAK55464.1
Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
      0.915
OAK55462.1
Mechanosensitive ion channel protein MscS; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.720
OAK55461.1
Endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.675
OAK55465.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.650
OAK55913.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
  0.638
OAK54833.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.632
OAK56936.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.632
OAK55457.1
Disulfide bond formation protein DsbA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.553
OAK55460.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.541
OAK55459.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.488
Your Current Organism:
Rhodococcus kyotonensis
NCBI taxonomy Id: 398843
Other names: CCTCC AB206088, IAM 15415, JCM 23211, R. kyotonensis, Rhodococcus kyotonensis Li et al. 2007, strain DS472
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.