Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OAK51468.1 | OAK55327.1 | A3K89_12540 | A3K89_20795 | PucR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.402 |
OAK55289.1 | OAK55290.1 | A3K89_20780 | A3K89_20790 | DNA-binding transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glycerophosphodiester phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.638 |
OAK55289.1 | OAK55327.1 | A3K89_20780 | A3K89_20795 | DNA-binding transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.571 |
OAK55289.1 | ispE | A3K89_20780 | A3K89_20785 | DNA-binding transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. | 0.708 |
OAK55290.1 | OAK55289.1 | A3K89_20790 | A3K89_20780 | Glycerophosphodiester phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA-binding transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.638 |
OAK55290.1 | OAK55327.1 | A3K89_20790 | A3K89_20795 | Glycerophosphodiester phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.694 |
OAK55290.1 | ispE | A3K89_20790 | A3K89_20785 | Glycerophosphodiester phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. | 0.894 |
OAK55327.1 | OAK51468.1 | A3K89_20795 | A3K89_12540 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | PucR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.402 |
OAK55327.1 | OAK55289.1 | A3K89_20795 | A3K89_20780 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA-binding transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.571 |
OAK55327.1 | OAK55290.1 | A3K89_20795 | A3K89_20790 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glycerophosphodiester phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.694 |
OAK55327.1 | OAK56477.1 | A3K89_20795 | A3K89_16830 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Na+/H+ antiporter subunit G; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.410 |
OAK55327.1 | ispE | A3K89_20795 | A3K89_20785 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. | 0.694 |
OAK56477.1 | OAK55327.1 | A3K89_16830 | A3K89_20795 | Na+/H+ antiporter subunit G; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.410 |
ispE | OAK55289.1 | A3K89_20785 | A3K89_20780 | 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. | DNA-binding transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.708 |
ispE | OAK55290.1 | A3K89_20785 | A3K89_20790 | 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. | Glycerophosphodiester phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.894 |
ispE | OAK55327.1 | A3K89_20785 | A3K89_20795 | 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.694 |