STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OAK53802.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (182 aa)    
Predicted Functional Partners:
OAK53801.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
OAK53798.1
ATP/GTP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.729
OAK53799.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.705
OAK53800.1
Peptidase M23; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.705
guaA
Glutamine-hydrolyzing GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
  0.663
OAK54853.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 0.641
OAK52010.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.641
OAK51626.1
Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.641
OAK51102.1
GDSL family lipase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.641
OAK56038.1
SGNH hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.641
Your Current Organism:
Rhodococcus kyotonensis
NCBI taxonomy Id: 398843
Other names: CCTCC AB206088, IAM 15415, JCM 23211, R. kyotonensis, Rhodococcus kyotonensis Li et al. 2007, strain DS472
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.