Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OAK51238.1 | OAK52335.1 | A3K89_13605 | A3K89_24605 | Haloacid dehalogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Flavin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.409 |
OAK52334.1 | OAK52335.1 | A3K89_24600 | A3K89_24605 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Flavin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.668 |
OAK52334.1 | menD | A3K89_24600 | A3K89_24610 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Belongs to the TPP enzyme family. MenD subfamily. | 0.483 |
OAK52335.1 | OAK51238.1 | A3K89_24605 | A3K89_13605 | Flavin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Haloacid dehalogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.409 |
OAK52335.1 | OAK52334.1 | A3K89_24605 | A3K89_24600 | Flavin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.668 |
OAK52335.1 | OAK54562.1 | A3K89_24605 | A3K89_04185 | Flavin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.619 |
OAK52335.1 | menD | A3K89_24605 | A3K89_24610 | Flavin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Belongs to the TPP enzyme family. MenD subfamily. | 0.782 |
OAK54562.1 | OAK52335.1 | A3K89_04185 | A3K89_24605 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Flavin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.619 |
menD | OAK52334.1 | A3K89_24610 | A3K89_24600 | 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Belongs to the TPP enzyme family. MenD subfamily. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.483 |
menD | OAK52335.1 | A3K89_24610 | A3K89_24605 | 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Belongs to the TPP enzyme family. MenD subfamily. | Flavin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.782 |