STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OsI_01135DUF1618 domain-containing protein. (386 aa)    
Predicted Functional Partners:
OsI_09623
Uncharacterized protein.
   
 0.774
OsI_34610
Uncharacterized protein.
   
 0.774
OsI_12837
Uncharacterized protein.
    
 0.767
OsI_12833
Uncharacterized protein.
    
 0.767
OsI_30425
Uncharacterized protein.
    
 0.690
OsI_09184
NOT2_3_5 domain-containing protein.
   
 0.659
OsI_13424
NOT2_3_5 domain-containing protein.
   
 0.659
OsI_20399
NOT2_3_5 domain-containing protein.
   
 0.659
OsI_20400
Uncharacterized protein.
   
 0.659
OsI_10162
Uncharacterized protein.
    
 0.658
Your Current Organism:
Oryza sativa Indica
NCBI taxonomy Id: 39946
Other names: Indian rice, Indica rice, O. sativa Indica Group, Oryza sativa (indica cultivar-group), Oryza sativa (indica group), Oryza sativa Indica Group, Oryza sativa subsp. indica, Oryza sativa subsp. indica Kato, Oryza sp. Poi-6, long-grained rice
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.