Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OsI_02012 | OsI_03573 | A2WQ84 | B8A925 | F-box domain-containing protein. | Uncharacterized protein. | 0.506 |
OsI_02012 | OsI_09955 | A2WQ84 | A2XCC4 | F-box domain-containing protein. | Uncharacterized protein. | 0.496 |
OsI_02012 | OsI_16898 | A2WQ84 | A2XW72 | F-box domain-containing protein. | Uncharacterized protein. | 0.510 |
OsI_02012 | OsI_23800 | A2WQ84 | A2YFB1 | F-box domain-containing protein. | Uncharacterized protein. | 0.483 |
OsI_02012 | OsI_31582 | A2WQ84 | B8BCL4 | F-box domain-containing protein. | F-box domain-containing protein. | 0.505 |
OsI_02012 | OsI_33207 | A2WQ84 | B8BGF1 | F-box domain-containing protein. | NAC domain-containing protein. | 0.497 |
OsI_02012 | OsI_36214 | A2WQ84 | A2ZEJ9 | F-box domain-containing protein. | BAG domain-containing protein. | 0.512 |
OsI_02012 | psbD | A2WQ84 | P0C436 | F-box domain-containing protein. | Photosystem II D2 protein; Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors. D2 is needed for assembly of a stable PSII complex. | 0.506 |
OsI_02012 | psbE | A2WQ84 | P0C369 | F-box domain-containing protein. | Cytochrome b559 subunit alpha; This b-type cytochrome is tightly associated with the reaction center of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. Belongs to the PsbE/PsbF family. | 0.507 |
OsI_02012 | psbF | A2WQ84 | P0C400 | F-box domain-containing protein. | Cytochrome b559 subunit beta; This b-type cytochrome is tightly associated with the reaction center of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. Belongs to the PsbE/PsbF family. | 0.509 |
OsI_03573 | OsI_02012 | B8A925 | A2WQ84 | Uncharacterized protein. | F-box domain-containing protein. | 0.506 |
OsI_03573 | OsI_09955 | B8A925 | A2XCC4 | Uncharacterized protein. | Uncharacterized protein. | 0.906 |
OsI_03573 | OsI_31582 | B8A925 | B8BCL4 | Uncharacterized protein. | F-box domain-containing protein. | 0.481 |
OsI_03573 | OsI_33207 | B8A925 | B8BGF1 | Uncharacterized protein. | NAC domain-containing protein. | 0.533 |
OsI_03573 | OsI_36214 | B8A925 | A2ZEJ9 | Uncharacterized protein. | BAG domain-containing protein. | 0.783 |
OsI_09955 | OsI_02012 | A2XCC4 | A2WQ84 | Uncharacterized protein. | F-box domain-containing protein. | 0.496 |
OsI_09955 | OsI_03573 | A2XCC4 | B8A925 | Uncharacterized protein. | Uncharacterized protein. | 0.906 |
OsI_09955 | OsI_23800 | A2XCC4 | A2YFB1 | Uncharacterized protein. | Uncharacterized protein. | 0.906 |
OsI_09955 | OsI_36214 | A2XCC4 | A2ZEJ9 | Uncharacterized protein. | BAG domain-containing protein. | 0.997 |
OsI_16898 | OsI_02012 | A2XW72 | A2WQ84 | Uncharacterized protein. | F-box domain-containing protein. | 0.510 |
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