STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OsI_04305Ammonium transporter. (497 aa)    
Predicted Functional Partners:
OsI_18340
Uncharacterized protein; Belongs to the P(II) protein family.
  
 0.984
OsI_17756
Glutamine synthetase.
  
  
 0.609
OsI_10575
Glutamine synthetase.
  
  
 0.550
OsI_08842
Glutamine synthetase.
  
  
 0.521
OsI_13264
Glutamine synthetase.
  
  
 0.521
OsI_33878
Uncharacterized protein.
  
  
 0.474
OsI_33879
Gln-synt_C domain-containing protein; Belongs to the glutamine synthetase family.
  
  
 0.474
OsI_13072
Uncharacterized protein.
      
 0.465
PSD2
Phosphatidylserine decarboxylase 2 alpha chain; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine. Belongs to the phosphatidylserine decarboxylase family. PSD-B subfamily. Eukaryotic type II sub-subfamily.
     
 0.460
OsI_39274
Uncharacterized protein.
      
 0.459
Your Current Organism:
Oryza sativa Indica
NCBI taxonomy Id: 39946
Other names: Indian rice, Indica rice, O. sativa Indica Group, Oryza sativa (indica cultivar-group), Oryza sativa (indica group), Oryza sativa Indica Group, Oryza sativa subsp. indica, Oryza sativa subsp. indica Kato, Oryza sp. Poi-6, long-grained rice
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.