STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OsI_21343Uncharacterized protein. (867 aa)    
Predicted Functional Partners:
RGBB
Guanine nucleotide-binding protein subunit beta; Guanine nucleotide-binding proteins (G proteins) are involved as modulators or transducers in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
   
 0.969
OsI_07020
HAUS6_N domain-containing protein.
    
 0.949
OsI_26549
Uncharacterized protein.
   
 0.864
OsI_08318
Ubiquitin carboxyl-terminal hydrolase.
    
 0.809
OsI_16869
Ubiquitin carboxyl-terminal hydrolase.
    
 0.809
OsI_17837
Ubiquitin carboxyl-terminal hydrolase.
    
 0.809
OsI_06757
Uncharacterized protein.
   
 0.801
OsI_21736
AAA domain-containing protein.
   
 0.751
OsI_28564
Protein kinase domain-containing protein.
   
 0.751
OsI_25180
AAA domain-containing protein.
   
 0.751
Your Current Organism:
Oryza sativa Indica
NCBI taxonomy Id: 39946
Other names: Indian rice, Indica rice, O. sativa Indica Group, Oryza sativa (indica cultivar-group), Oryza sativa (indica group), Oryza sativa Indica Group, Oryza sativa subsp. indica, Oryza sativa subsp. indica Kato, Oryza sp. Poi-6, long-grained rice
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