Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OsI_04037 | OsI_05569 | A2WVW4 | A2X031 | KH domain-containing protein. | Uncharacterized protein; Belongs to the NOB1 family. | 0.996 |
OsI_04037 | OsI_10048 | A2WVW4 | B8ANC7 | KH domain-containing protein. | WD_REPEATS_REGION domain-containing protein. | 0.958 |
OsI_04037 | OsI_13989 | A2WVW4 | A2XN57 | KH domain-containing protein. | Uncharacterized protein. | 0.906 |
OsI_04037 | OsI_13996 | A2WVW4 | A2XN63 | KH domain-containing protein. | S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. | 0.906 |
OsI_04037 | OsI_26918 | A2WVW4 | A2YNU3 | KH domain-containing protein. | Uncharacterized protein. | 0.741 |
OsI_04037 | OsI_31018 | A2WVW4 | B8BER5 | KH domain-containing protein. | Uncharacterized protein. | 0.998 |
OsI_04037 | OsI_35872 | A2WVW4 | B8BK56 | KH domain-containing protein. | Bms1-type G domain-containing protein. | 0.997 |
OsI_04037 | PRMT3 | A2WVW4 | A2YP56 | KH domain-containing protein. | Probable protein arginine N-methyltransferase 3; Methylates (mono and asymmetric dimethylation) the guanidino nitrogens of arginyl residues in some proteins. | 0.751 |
OsI_04340 | OsI_26918 | A2WWR4 | A2YNU3 | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | Uncharacterized protein. | 0.586 |
OsI_04340 | PRMT3 | A2WWR4 | A2YP56 | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | Probable protein arginine N-methyltransferase 3; Methylates (mono and asymmetric dimethylation) the guanidino nitrogens of arginyl residues in some proteins. | 0.916 |
OsI_05569 | OsI_04037 | A2X031 | A2WVW4 | Uncharacterized protein; Belongs to the NOB1 family. | KH domain-containing protein. | 0.996 |
OsI_05569 | OsI_09726 | A2X031 | B8ALU9 | Uncharacterized protein; Belongs to the NOB1 family. | KH domain-containing protein. | 0.996 |
OsI_05569 | OsI_10048 | A2X031 | B8ANC7 | Uncharacterized protein; Belongs to the NOB1 family. | WD_REPEATS_REGION domain-containing protein. | 0.941 |
OsI_05569 | OsI_13989 | A2X031 | A2XN57 | Uncharacterized protein; Belongs to the NOB1 family. | Uncharacterized protein. | 0.938 |
OsI_05569 | OsI_13996 | A2X031 | A2XN63 | Uncharacterized protein; Belongs to the NOB1 family. | S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. | 0.938 |
OsI_05569 | OsI_26918 | A2X031 | A2YNU3 | Uncharacterized protein; Belongs to the NOB1 family. | Uncharacterized protein. | 0.930 |
OsI_05569 | OsI_31018 | A2X031 | B8BER5 | Uncharacterized protein; Belongs to the NOB1 family. | Uncharacterized protein. | 0.999 |
OsI_05569 | OsI_35872 | A2X031 | B8BK56 | Uncharacterized protein; Belongs to the NOB1 family. | Bms1-type G domain-containing protein. | 0.999 |
OsI_05569 | PRMT3 | A2X031 | A2YP56 | Uncharacterized protein; Belongs to the NOB1 family. | Probable protein arginine N-methyltransferase 3; Methylates (mono and asymmetric dimethylation) the guanidino nitrogens of arginyl residues in some proteins. | 0.758 |
OsI_09726 | OsI_05569 | B8ALU9 | A2X031 | KH domain-containing protein. | Uncharacterized protein; Belongs to the NOB1 family. | 0.996 |
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