Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OsI_04340 | OsI_08640 | A2WWR4 | B8AHA6 | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | Uncharacterized protein. | 0.960 |
OsI_04340 | OsI_08641 | A2WWR4 | B8AHA7 | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | Uncharacterized protein. | 0.960 |
OsI_04340 | OsI_10045 | A2WWR4 | A2XCL2 | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | Uncharacterized protein. | 0.969 |
OsI_04340 | OsI_10465 | A2WWR4 | A2XDS0 | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | WD_REPEATS_REGION domain-containing protein. | 0.981 |
OsI_04340 | OsI_35088 | A2WWR4 | A2ZBD9 | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | B30.2/SPRY domain-containing protein. | 0.974 |
OsI_04340 | OsI_35548 | A2WWR4 | A2ZCN8 | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | Uncharacterized protein. | 0.933 |
OsI_04340 | OsI_37439 | A2WWR4 | B8BM07 | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | B30.2/SPRY domain-containing protein. | 0.974 |
OsI_08640 | OsI_04340 | B8AHA6 | A2WWR4 | Uncharacterized protein. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.960 |
OsI_08640 | OsI_08641 | B8AHA6 | B8AHA7 | Uncharacterized protein. | Uncharacterized protein. | 0.911 |
OsI_08640 | OsI_10045 | B8AHA6 | A2XCL2 | Uncharacterized protein. | Uncharacterized protein. | 0.956 |
OsI_08640 | OsI_10465 | B8AHA6 | A2XDS0 | Uncharacterized protein. | WD_REPEATS_REGION domain-containing protein. | 0.877 |
OsI_08640 | OsI_11344 | B8AHA6 | B8ANE2 | Uncharacterized protein. | Guanylate kinase-like domain-containing protein. | 0.634 |
OsI_08640 | OsI_20843 | B8AHA6 | B8AW83 | Uncharacterized protein. | WD_REPEATS_REGION domain-containing protein. | 0.516 |
OsI_08640 | OsI_26690 | B8AHA6 | B8B809 | Uncharacterized protein. | WD_REPEATS_REGION domain-containing protein. | 0.516 |
OsI_08640 | OsI_35088 | B8AHA6 | A2ZBD9 | Uncharacterized protein. | B30.2/SPRY domain-containing protein. | 0.860 |
OsI_08640 | OsI_35548 | B8AHA6 | A2ZCN8 | Uncharacterized protein. | Uncharacterized protein. | 0.932 |
OsI_08640 | OsI_37439 | B8AHA6 | B8BM07 | Uncharacterized protein. | B30.2/SPRY domain-containing protein. | 0.860 |
OsI_08641 | OsI_04340 | B8AHA7 | A2WWR4 | Uncharacterized protein. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.960 |
OsI_08641 | OsI_08640 | B8AHA7 | B8AHA6 | Uncharacterized protein. | Uncharacterized protein. | 0.911 |
OsI_08641 | OsI_10045 | B8AHA7 | A2XCL2 | Uncharacterized protein. | Uncharacterized protein. | 0.956 |
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