Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OsI_03865 | OsI_08767 | B8AA47 | A2X953 | Protein DETOXIFICATION; Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family. | SAM-dependent MTase TRM10-type domain-containing protein. | 0.536 |
OsI_03865 | OsI_11307 | B8AA47 | A2XG06 | Protein DETOXIFICATION; Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family. | Uncharacterized protein. | 0.400 |
OsI_03865 | OsI_33448 | B8AA47 | A2Z6X8 | Protein DETOXIFICATION; Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family. | Uncharacterized protein; Belongs to the GST superfamily. | 0.522 |
OsI_03865 | OsI_36989 | B8AA47 | B8BII2 | Protein DETOXIFICATION; Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family. | Uncharacterized protein. | 0.406 |
OsI_08767 | OsI_03865 | A2X953 | B8AA47 | SAM-dependent MTase TRM10-type domain-containing protein. | Protein DETOXIFICATION; Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family. | 0.536 |
OsI_11307 | OsI_03865 | A2XG06 | B8AA47 | Uncharacterized protein. | Protein DETOXIFICATION; Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family. | 0.400 |
OsI_33448 | OsI_03865 | A2Z6X8 | B8AA47 | Uncharacterized protein; Belongs to the GST superfamily. | Protein DETOXIFICATION; Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family. | 0.522 |
OsI_36989 | OsI_03865 | B8BII2 | B8AA47 | Uncharacterized protein. | Protein DETOXIFICATION; Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family. | 0.406 |