STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OsI_11930Ribosomal_L2_C domain-containing protein. (154 aa)    
Predicted Functional Partners:
OsI_01192
Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.
 
 0.995
OsI_09955
Uncharacterized protein.
   
 0.994
OsI_01562
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
 0.993
OsI_09799
Uncharacterized protein.
 
 0.992
OsI_27602
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family.
   
 0.992
OsI_00930
Uncharacterized protein.
  
 
 0.991
rpl16
50S ribosomal protein L16, chloroplastic; Belongs to the universal ribosomal protein uL16 family.
 
 0.991
OsI_20170
Uncharacterized protein.
  
 
 0.990
OsI_24210
KOW domain-containing protein; Belongs to the universal ribosomal protein uL24 family.
  
 0.990
rps12-A
30S ribosomal protein S12, chloroplastic; With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits (By similarity).
 
 
 0.990
Your Current Organism:
Oryza sativa Indica
NCBI taxonomy Id: 39946
Other names: Indian rice, Indica rice, O. sativa Indica Group, Oryza sativa (indica cultivar-group), Oryza sativa (indica group), Oryza sativa Indica Group, Oryza sativa subsp. indica, Oryza sativa subsp. indica Kato, Oryza sp. Poi-6, long-grained rice
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.