STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OsI_16364DUF4110 domain-containing protein. (662 aa)    
Predicted Functional Partners:
OsI_30406
CBF domain-containing protein.
   
    0.779
OsI_05481
Uncharacterized protein.
   
    0.701
OsI_05476
Uncharacterized protein.
   
    0.701
OsI_11428
Bms1-type G domain-containing protein.
   
    0.700
OsI_04037
KH domain-containing protein.
    
   0.637
OsI_09726
KH domain-containing protein.
    
   0.637
OsI_20654
WD_REPEATS_REGION domain-containing protein.
   
    0.635
OsI_25602
Protein MAK16 homolog; Belongs to the MAK16 family.
   
    0.568
OsI_13935
Uncharacterized protein.
   
    0.554
OsI_14130
Uncharacterized protein.
   
    0.554
Your Current Organism:
Oryza sativa Indica
NCBI taxonomy Id: 39946
Other names: Indian rice, Indica rice, O. sativa Indica Group, Oryza sativa (indica cultivar-group), Oryza sativa (indica group), Oryza sativa Indica Group, Oryza sativa subsp. indica, Oryza sativa subsp. indica Kato, Oryza sp. Poi-6, long-grained rice
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.