STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OsI_27232SWIM-type domain-containing protein. (752 aa)    
Predicted Functional Partners:
OsI_01038
Uncharacterized protein.
    
 0.784
OsI_26946
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.766
OsI_02149
Uncharacterized protein.
    
 0.670
OsI_27084
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
   
 0.657
OsI_20813
SANT domain-containing protein.
   
 0.626
OsI_30356
MULE domain-containing protein.
  
 
   0.604
OsI_31331
Peptidase_M1 domain-containing protein.
    
 0.576
OsI_23890
Bromo domain-containing protein.
    
 0.568
OsI_23891
Uncharacterized protein.
    
 0.568
OsI_31468
Uncharacterized protein.
    
 0.560
Your Current Organism:
Oryza sativa Indica
NCBI taxonomy Id: 39946
Other names: Indian rice, Indica rice, O. sativa Indica Group, Oryza sativa (indica cultivar-group), Oryza sativa (indica group), Oryza sativa Indica Group, Oryza sativa subsp. indica, Oryza sativa subsp. indica Kato, Oryza sp. Poi-6, long-grained rice
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.