STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OsI_25941Uncharacterized protein; Belongs to the argonaute family. (1086 aa)    
Predicted Functional Partners:
OsI_16596
Uncharacterized protein.
   
 0.813
OsI_05331
RPOLA_N domain-containing protein.
   
 0.792
OsI_05888
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.792
OsI_34085
Uncharacterized protein.
   
 0.790
OsI_04862
Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.
   
 0.765
OsI_09779
Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.
   
 0.746
OsI_38094
Uncharacterized protein.
   
 0.736
OsI_12391
DRBM domain-containing protein.
   
 0.717
OsI_12390
Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.
   
 0.717
OsI_01300
Uncharacterized protein.
    
 0.712
Your Current Organism:
Oryza sativa Indica
NCBI taxonomy Id: 39946
Other names: Indian rice, Indica rice, O. sativa Indica Group, Oryza sativa (indica cultivar-group), Oryza sativa (indica group), Oryza sativa Indica Group, Oryza sativa subsp. indica, Oryza sativa subsp. indica Kato, Oryza sp. Poi-6, long-grained rice
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