STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OsI_32823Uncharacterized protein. (76 aa)    
Predicted Functional Partners:
OsI_16246
Uncharacterized protein.
  
     0.521
OsI_26408
Uncharacterized protein.
  
     0.521
OsI_16209
Uncharacterized protein.
  
     0.512
OsI_16249
Uncharacterized protein.
  
     0.510
OsI_16251
Uncharacterized protein.
  
     0.510
OsI_07835
HMA domain-containing protein.
  
     0.508
OsI_21895
Uncharacterized protein.
  
     0.502
OsI_18037
Uncharacterized protein.
  
     0.476
OsI_07836
HMA domain-containing protein.
  
     0.474
OsI_30005
Uncharacterized protein.
  
     0.473
Your Current Organism:
Oryza sativa Indica
NCBI taxonomy Id: 39946
Other names: Indian rice, Indica rice, O. sativa Indica Group, Oryza sativa (indica cultivar-group), Oryza sativa (indica group), Oryza sativa Indica Group, Oryza sativa subsp. indica, Oryza sativa subsp. indica Kato, Oryza sp. Poi-6, long-grained rice
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.