Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OsI_09099 | OsI_29535 | B8AJ60 | B8BBJ7 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | FAD-binding FR-type domain-containing protein. | 0.997 |
OsI_09099 | OsI_29538 | B8AJ60 | B8BBJ8 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family. | 0.997 |
OsI_09099 | OsI_29539 | B8AJ60 | B8BBJ9 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Uncharacterized protein. | 0.997 |
OsI_09099 | OsI_29540 | B8AJ60 | B8BBK0 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Cytochrome b5 heme-binding domain-containing protein. | 0.997 |
OsI_09099 | OsI_29541 | B8AJ60 | A2YW32 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Uncharacterized protein. | 0.997 |
OsI_09099 | OsI_33072 | B8AJ60 | A2Z5Z8 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | FAD-binding FR-type domain-containing protein. | 0.997 |
OsI_09099 | OsI_33190 | B8AJ60 | B8BGE1 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | GH10 domain-containing protein. | 0.646 |
OsI_10713 | OsI_11043 | B8AK02 | B8ALH9 | Beta-Casp domain-containing protein. | Uncharacterized protein. | 0.999 |
OsI_10713 | OsI_31281 | B8AK02 | B8BF87 | Beta-Casp domain-containing protein. | Uncharacterized protein. | 0.999 |
OsI_10713 | OsI_33190 | B8AK02 | B8BGE1 | Beta-Casp domain-containing protein. | GH10 domain-containing protein. | 0.668 |
OsI_11043 | OsI_10713 | B8ALH9 | B8AK02 | Uncharacterized protein. | Beta-Casp domain-containing protein. | 0.999 |
OsI_11043 | OsI_31281 | B8ALH9 | B8BF87 | Uncharacterized protein. | Uncharacterized protein. | 0.999 |
OsI_11043 | OsI_33190 | B8ALH9 | B8BGE1 | Uncharacterized protein. | GH10 domain-containing protein. | 0.647 |
OsI_29535 | OsI_09099 | B8BBJ7 | B8AJ60 | FAD-binding FR-type domain-containing protein. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.997 |
OsI_29535 | OsI_29538 | B8BBJ7 | B8BBJ8 | FAD-binding FR-type domain-containing protein. | NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family. | 0.997 |
OsI_29535 | OsI_29539 | B8BBJ7 | B8BBJ9 | FAD-binding FR-type domain-containing protein. | Uncharacterized protein. | 0.997 |
OsI_29535 | OsI_29540 | B8BBJ7 | B8BBK0 | FAD-binding FR-type domain-containing protein. | Cytochrome b5 heme-binding domain-containing protein. | 0.997 |
OsI_29535 | OsI_29541 | B8BBJ7 | A2YW32 | FAD-binding FR-type domain-containing protein. | Uncharacterized protein. | 0.997 |
OsI_29535 | OsI_33072 | B8BBJ7 | A2Z5Z8 | FAD-binding FR-type domain-containing protein. | FAD-binding FR-type domain-containing protein. | 0.997 |
OsI_29535 | OsI_33190 | B8BBJ7 | B8BGE1 | FAD-binding FR-type domain-containing protein. | GH10 domain-containing protein. | 0.646 |
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